woSource

Class DoseReader_Oct2012_oldUR

java.lang.Object

woSource.DoseReader_Oct2012_oldUR

All Implemented Interfaces:

ij.plugin.PlugIn

public class DoseReader_Oct2012_oldUR
extends java.lang.Object
implements ij.plugin.PlugIn

Field Summary

Fields

Modifier and Type	Field and Description
int	Depth
float[]	doseDepths
float[]	doseHeights
Rectangle3D	doseRect
float[][][]	doseValues
float[]	doseWidths
int	Height
java.lang.String	Label
int	rOrder
int	thetaOrder
boolean	wasDicom
int	Width

Constructor Summary

Constructors

Constructor and Description
DoseReader_Oct2012_oldUR()
DoseReader_Oct2012_oldUR(java.lang.String arg)

Method Summary

Modifier and Type	Method and Description
void	avgToCenter()
void	cropDoseField(int doffset, int woffset, int hoffset, int newdepth, int newwidth, int newheight)
void	fitDoseCoeffs()
void	flipDepth()
void	flipHeight()
void	flipWidth()
boolean	Read(java.lang.String arg)
void	run(java.lang.String arg) This method is called when the plugin is loaded.
void	showAbout()
void	smoothDoseValues(int rOrder, int thetaOrder)
java.lang.String	toString()
int[]	transformToImageSpace(java.util.Properties[] CTprops, float firstSliceZ, ij.gui.Roi roi)
boolean	Write()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

Label

public java.lang.String Label

Width

public int Width

Height

public int Height

Depth

public int Depth

doseDepths

public float[] doseDepths

doseWidths

public float[] doseWidths

doseHeights

public float[] doseHeights

doseValues

public float[][][] doseValues

doseRect

public Rectangle3D doseRect

rOrder

public int rOrder

thetaOrder

public int thetaOrder

wasDicom

public boolean wasDicom

Constructor Detail

DoseReader_Oct2012_oldUR

public DoseReader_Oct2012_oldUR(java.lang.String arg)

DoseReader_Oct2012_oldUR

public DoseReader_Oct2012_oldUR()

Method Detail

run

public void run(java.lang.String arg)

Description copied from interface: ij.plugin.PlugIn

This method is called when the plugin is loaded. 'arg', which may be blank, is the argument specified for this plugin in IJ_Props.txt.

Specified by:

run in interface ij.plugin.PlugIn

showAbout

public void showAbout()

avgToCenter

public void avgToCenter()

cropDoseField

public void cropDoseField(int doffset,
                          int woffset,
                          int hoffset,
                          int newdepth,
                          int newwidth,
                          int newheight)

transformToImageSpace

public int[] transformToImageSpace(java.util.Properties[] CTprops,
                                   float firstSliceZ,
                                   ij.gui.Roi roi)

flipDepth

public void flipDepth()

flipWidth

public void flipWidth()

flipHeight

public void flipHeight()

Read

public boolean Read(java.lang.String arg)
             throws java.io.IOException

Throws:

java.io.IOException

Write

public boolean Write()

fitDoseCoeffs

public void fitDoseCoeffs()

smoothDoseValues

public void smoothDoseValues(int rOrder,
                             int thetaOrder)

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object